PDF] CLIPSeqTools—a novel bioinformatics CLIP-seq analysis suite | Semantic Scholar
PRAS: Predicting functional targets of RNA binding proteins based on CLIP- seq peaks | PLOS Computational Biology
par-clip | RNA-Seq Blog
CircTools: Softwares for Discovering circRNA-microRNA Interactions from CLIP -Seq Datasets
SURF: integrative analysis of a compendium of RNA-seq and CLIP-seq datasets highlights complex governing of alternative transcriptional regulation by RNA-binding proteins | Genome Biology | Full Text
CLIP-Seq and massively parallel functional analysis of the CELF6 RNA binding protein reveals a role in destabilizing synaptic gene mRNAs through interaction with 3'UTR elements in vivo | bioRxiv
iCLIP data analysis: A complete pipeline from sequencing reads to RBP binding sites - ScienceDirect
CLIP and complementary methods | Nature Reviews Methods Primers
POSTAR3
Pipeline for extracting MIWI CLIP-Seq features (see Section 2). The RNA... | Download Scientific Diagram
CLIP-Seq Service - Creative BioMart
Learning to Predict miRNA-mRNA Interactions from AGO CLIP Sequencing and CLASH Data | PLOS Computational Biology
Current methods in the analysis of CLIP-Seq data
Computational Analysis of CLIP-seq Data
Computational approaches for the analysis of RNA–protein interactions: A primer for biologists - ScienceDirect
Mapping RNA Interactions to Proteins in Virions Using CLIP-Seq | SpringerLink
CLIP-seq data for different RBPs, CLIP technologies, and peak calling... | Download Scientific Diagram
omniCLIP: probabilistic identification of protein-RNA interactions from CLIP -seq data | Genome Biology | Full Text
circTools: identify and annotate circRNAs and their interactions with microRNAs (miRNAs) from large-scale <strong>CLIP-Seq (HITS-CLIP, PAR-CLIP, iCLIP, CLASH)</strong> and RNA-seq data.
CLIP-Seq data analysis from pre-processing to motif detection
A large-scale binding and functional map of human RNA-binding proteins | Nature
PDF] Current methods in the analysis of CLIP-Seq data | Semantic Scholar